SeqAn3 3.4.0
The Modern C++ library for sequence analysis.
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alignment/configuration/all.hpp
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1// SPDX-FileCopyrightText: 2006-2025 Knut Reinert & Freie Universität Berlin
2// SPDX-FileCopyrightText: 2016-2025 Knut Reinert & MPI für molekulare Genetik
3// SPDX-License-Identifier: BSD-3-Clause
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29#pragma once
30
31#include <seqan3/alignment/configuration/align_config_band.hpp>
32#include <seqan3/alignment/configuration/align_config_debug.hpp>
33#include <seqan3/alignment/configuration/align_config_edit.hpp>
34#include <seqan3/alignment/configuration/align_config_gap_cost_affine.hpp>
35#include <seqan3/alignment/configuration/align_config_method.hpp>
36#include <seqan3/alignment/configuration/align_config_min_score.hpp>
37#include <seqan3/alignment/configuration/align_config_on_result.hpp>
38#include <seqan3/alignment/configuration/align_config_output.hpp>
39#include <seqan3/alignment/configuration/align_config_parallel.hpp>
40#include <seqan3/alignment/configuration/align_config_result_type.hpp>
41#include <seqan3/alignment/configuration/align_config_score_type.hpp>
42#include <seqan3/alignment/configuration/align_config_scoring_scheme.hpp>
43#include <seqan3/alignment/configuration/align_config_vectorised.hpp>
align_config_band.hpp
Provides seqan3::detail::align_config_band.
align_config_debug.hpp
Provides seqan3::align_cfg::detail::debug.
align_config_edit.hpp
Provides seqan3::align_cfg::edit_scheme.
align_config_gap_cost_affine.hpp
Provides seqan3::align_config::gap_cost_affine.
align_config_method.hpp
Provides global and local alignment configurations.
align_config_min_score.hpp
Provides seqan3::align_cfg::min_score configuration.
align_config_on_result.hpp
Provides seqan3::align_cfg::on_result.
align_config_output.hpp
Provides configuration for alignment output.
align_config_parallel.hpp
Provides seqan3::align_cfg::parallel configuration.
align_config_result_type.hpp
Provides seqan3::align_cfg::detail::result_type.
align_config_score_type.hpp
Provides alignment configuration seqan3::align_cfg::score_type.
align_config_scoring_scheme.hpp
Provides seqan3::align_cfg::scoring_scheme.
align_config_vectorised.hpp
Provides seqan3::align_cfg::vectorised configuration.
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